Comparative transcriptome and proteome analysis to reveal the biosynthesis of gold nanoparticles in Arabidopsis
Identifieur interne : 000276 ( Main/Exploration ); précédent : 000275; suivant : 000277Comparative transcriptome and proteome analysis to reveal the biosynthesis of gold nanoparticles in Arabidopsis
Auteurs : Manish Tiwari [États-Unis] ; Sneha Krishnamurthy [États-Unis] ; Devesh Shukla [États-Unis] ; Jeffrey Kiiskila [États-Unis] ; Ajay Jain [Inde] ; Rupali Datta [États-Unis] ; Nilesh Sharma [États-Unis] ; Shivendra V. Sahi [États-Unis]Source :
- Scientific Reports [ 2045-2322 ] ; 2016.
Abstract
A large number of plants have been tested and exploited in search of a green chemistry approach for the fabrication of gold or other precious metal nanomaterials. Despite the potential of plant based methods, very little is known about the underlying biochemical reactions and genes involved in the biotransformation mechanism of AuCl4 into gold nanoparticles (AuNPs). In this research, we thus focused on studying the effect of Au on growth and nanoparticles formation by analyses of transcriptome, proteome and ionome shift in
Url:
DOI: 10.1038/srep21733
PubMed: 26902325
PubMed Central: 4763195
Affiliations:
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Sahi</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Biology, Western Kentucky University, 1906 College heights, Bowling Green</institution>, 42101-1080 Kentucky,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26902325</idno><idno type="pmc">4763195</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4763195</idno><idno type="RBID">PMC:4763195</idno><idno type="doi">10.1038/srep21733</idno><date when="2016">2016</date><idno type="wicri:Area/Pmc/Corpus">000457</idno><idno type="wicri:Area/Pmc/Curation">000456</idno><idno type="wicri:Area/Pmc/Checkpoint">000223</idno><idno type="wicri:Area/Ncbi/Merge">001F11</idno><idno type="wicri:Area/Ncbi/Curation">001F11</idno><idno type="wicri:Area/Ncbi/Checkpoint">001F11</idno><idno type="wicri:Area/Main/Merge">000276</idno><idno type="wicri:Area/Main/Curation">000276</idno><idno type="wicri:Area/Main/Exploration">000276</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Comparative transcriptome and proteome analysis to reveal the biosynthesis of gold nanoparticles in Arabidopsis</title><author><name sortKey="Tiwari, Manish" sort="Tiwari, Manish" uniqKey="Tiwari M" first="Manish" last="Tiwari">Manish Tiwari</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Biology, Western Kentucky University, 1906 College heights, Bowling Green</institution>, 42101-1080 Kentucky,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Krishnamurthy, Sneha" sort="Krishnamurthy, Sneha" uniqKey="Krishnamurthy S" first="Sneha" last="Krishnamurthy">Sneha Krishnamurthy</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Biology, Western Kentucky University, 1906 College heights, Bowling Green</institution>, 42101-1080 Kentucky,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Shukla, Devesh" sort="Shukla, Devesh" uniqKey="Shukla D" first="Devesh" last="Shukla">Devesh Shukla</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Biology, Western Kentucky University, 1906 College heights, Bowling Green</institution>, 42101-1080 Kentucky,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kiiskila, Jeffrey" sort="Kiiskila, Jeffrey" uniqKey="Kiiskila J" first="Jeffrey" last="Kiiskila">Jeffrey Kiiskila</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>Department of Biological Sciences, Michigan Technological University</institution>, Houghton, Michigan,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Jain, Ajay" sort="Jain, Ajay" uniqKey="Jain A" first="Ajay" last="Jain">Ajay Jain</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>National Research Centre on Plant Biotechnology, Lal Bahadur Shastri Building, Pusa Campus</institution>, New Delhi, 110012,<country>India</country></nlm:aff><country xml:lang="fr">Inde</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Datta, Rupali" sort="Datta, Rupali" uniqKey="Datta R" first="Rupali" last="Datta">Rupali Datta</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>Department of Biological Sciences, Michigan Technological University</institution>, Houghton, Michigan,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sharma, Nilesh" sort="Sharma, Nilesh" uniqKey="Sharma N" first="Nilesh" last="Sharma">Nilesh Sharma</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Biology, Western Kentucky University, 1906 College heights, Bowling Green</institution>, 42101-1080 Kentucky,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Sahi, Shivendra V" sort="Sahi, Shivendra V" uniqKey="Sahi S" first="Shivendra V." last="Sahi">Shivendra V. Sahi</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>Department of Biology, Western Kentucky University, 1906 College heights, Bowling Green</institution>, 42101-1080 Kentucky,<country>USA</country></nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Scientific Reports</title><idno type="eISSN">2045-2322</idno><imprint><date when="2016">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>A large number of plants have been tested and exploited in search of a green chemistry approach for the fabrication of gold or other precious metal nanomaterials. Despite the potential of plant based methods, very little is known about the underlying biochemical reactions and genes involved in the biotransformation mechanism of AuCl<sub>4</sub> into gold nanoparticles (AuNPs). In this research, we thus focused on studying the effect of Au on growth and nanoparticles formation by analyses of transcriptome, proteome and ionome shift in <italic>Arabidopsis</italic>. Au exposure favored the growth of <italic>Arabidopsis</italic> seedling and induced formation of nanoparticles in root and shoot, as indicated by optical and hyperspectral imaging. Root transcriptome analysis demonstrated the differential expression of the members of <italic>WRKY</italic>, <italic>MYB</italic> and <italic>BHLH</italic> gene families, which are involved in the Fe and other essential metals homeostasis. The proteome analysis revealed that Glutathione S-transferases were induced in the shoot and suggested its potential role in the biosynthesis AuNPs. This study also demonstrated the role of plant hormone auxin in determining the Au induced root system architecture. This is the first study using an integrated approach to understand the <italic>in planta</italic> biotransformation of KAuCl<sub>4</sub> into AuNPs.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Chen, P C" uniqKey="Chen P">P. C. Chen</name></author><author><name sortKey="Mwakwari, S C" uniqKey="Mwakwari S">S. C. Mwakwari</name></author><author><name sortKey="Oyelere, A K" uniqKey="Oyelere A">A. K. Oyelere</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Chen, J" uniqKey="Chen J">J. Chen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yeh, Y C" uniqKey="Yeh Y">Y. C. Yeh</name></author><author><name sortKey="Creran, B" uniqKey="Creran B">B. Creran</name></author><author><name sortKey="Rotello, V M" uniqKey="Rotello V">V. M. 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Oikawa</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Muller, K" uniqKey="Muller K">K. Muller</name></author><author><name sortKey="Linkies, A" uniqKey="Linkies A">A. Linkies</name></author><author><name sortKey="Leubner Metzger, G" uniqKey="Leubner Metzger G">G. Leubner-Metzger</name></author><author><name sortKey="Kermode, A R" uniqKey="Kermode A">A. R. Kermode</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Yi, X" uniqKey="Yi X">X. Yi</name></author><author><name sortKey="Du, Z" uniqKey="Du Z">Z. Du</name></author><author><name sortKey="Su, Z" uniqKey="Su Z">Z. Su</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Livak, K J" uniqKey="Livak K">K. J. Livak</name></author><author><name sortKey="Schmittgen, T D" uniqKey="Schmittgen T">T. D. Schmittgen</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wang, X" uniqKey="Wang X">X. Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Shevchenko, A" uniqKey="Shevchenko A">A. Shevchenko</name></author><author><name sortKey="Tomas, H" uniqKey="Tomas H">H. Tomas</name></author><author><name sortKey="Havlis, J" uniqKey="Havlis J">J. Havlis</name></author><author><name sortKey="Olsen, J V" uniqKey="Olsen J">J. V. Olsen</name></author><author><name sortKey="Mann, M" uniqKey="Mann M">M. Mann</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Inde</li><li>États-Unis</li></country></list><tree><country name="États-Unis"><noRegion><name sortKey="Tiwari, Manish" sort="Tiwari, Manish" uniqKey="Tiwari M" first="Manish" last="Tiwari">Manish Tiwari</name></noRegion><name sortKey="Datta, Rupali" sort="Datta, Rupali" uniqKey="Datta R" first="Rupali" last="Datta">Rupali Datta</name><name sortKey="Kiiskila, Jeffrey" sort="Kiiskila, Jeffrey" uniqKey="Kiiskila J" first="Jeffrey" last="Kiiskila">Jeffrey Kiiskila</name><name sortKey="Krishnamurthy, Sneha" sort="Krishnamurthy, Sneha" uniqKey="Krishnamurthy S" first="Sneha" last="Krishnamurthy">Sneha Krishnamurthy</name><name sortKey="Sahi, Shivendra V" sort="Sahi, Shivendra V" uniqKey="Sahi S" first="Shivendra V." last="Sahi">Shivendra V. Sahi</name><name sortKey="Sharma, Nilesh" sort="Sharma, Nilesh" uniqKey="Sharma N" first="Nilesh" last="Sharma">Nilesh Sharma</name><name sortKey="Shukla, Devesh" sort="Shukla, Devesh" uniqKey="Shukla D" first="Devesh" last="Shukla">Devesh Shukla</name></country><country name="Inde"><noRegion><name sortKey="Jain, Ajay" sort="Jain, Ajay" uniqKey="Jain A" first="Ajay" last="Jain">Ajay Jain</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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